STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LDN8_EUTSAt-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (341 aa)    
Predicted Functional Partners:
V4N9Y0_EUTSA
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.998
V4L1U6_EUTSA
t-SNARE coiled-coil homology domain-containing protein.
   
 0.997
V4MHU0_EUTSA
t-SNARE coiled-coil homology domain-containing protein.
   
 0.997
V4M7M8_EUTSA
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.994
V4NC82_EUTSA
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.994
V4LHA8_EUTSA
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.991
V4K591_EUTSA
Uncharacterized protein.
    
 0.990
V4KBY5_EUTSA
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.990
V4L2E7_EUTSA
TPR_REGION domain-containing protein.
    
 0.988
V4L031_EUTSA
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.977
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: medium (52%) [HD]