STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KY39_EUTSAUncharacterized protein. (430 aa)    
Predicted Functional Partners:
V4KK63_EUTSA
Uncharacterized protein.
    
 0.674
V4LQQ3_EUTSA
DUF4101 domain-containing protein.
    
 
 0.672
V4M0R8_EUTSA
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.648
V4LVQ1_EUTSA
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.617
V4LK45_EUTSA
Uncharacterized protein.
    
 0.611
V4LZQ6_EUTSA
DUF4101 domain-containing protein.
    
 
 0.607
V4LL38_EUTSA
Uncharacterized protein.
   
  
 0.601
V4JSM8_EUTSA
Uncharacterized protein.
      
 0.598
V4MKI9_EUTSA
CbiA domain-containing protein.
      
 0.596
V4KXC0_EUTSA
Uncharacterized protein.
      
 0.585
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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