STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4M058_EUTSAUncharacterized protein. (586 aa)    
Predicted Functional Partners:
V4L3J0_EUTSA
Nucleoside diphosphate kinase.
    
 0.953
V4MJN5_EUTSA
Nucleoside diphosphate kinase.
    
 0.953
V4MYK4_EUTSA
Nucleoside diphosphate kinase.
    
 0.953
V4N0B0_EUTSA
Nucleoside diphosphate kinase.
    
 0.953
V4M030_EUTSA
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
 0.909
V4MG59_EUTSA
Uncharacterized protein.
     
  0.900
V4K999_EUTSA
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.891
V4L5W0_EUTSA
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.877
V4LED4_EUTSA
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.870
V4LZU7_EUTSA
Uncharacterized protein.
   
 
 0.868
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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