STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4P482_EUTSAUncharacterized protein. (293 aa)    
Predicted Functional Partners:
V4KKV3_EUTSA
Thymidine kinase.
    
 0.969
V4LZF6_EUTSA
Thymidine kinase.
    
 0.969
V4MAU4_EUTSA
IU_nuc_hydro domain-containing protein.
   
 0.962
V4MS39_EUTSA
SurE domain-containing protein.
     
 0.928
V4KDM8_EUTSA
SurE domain-containing protein.
   
 
  0.904
V4M5Q9_EUTSA
Uncharacterized protein.
  
  
 
0.903
V4MDE8_EUTSA
CMP/dCMP-type deaminase domain-containing protein.
  
  
 
0.902
V4M8A8_EUTSA
Uncharacterized protein.
     
  0.900
V4MMH9_EUTSA
Uridine kinase; Belongs to the uridine kinase family.
    
 0.838
V4JR89_EUTSA
CYTH domain-containing protein.
    
 0.825
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.