STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4L1H9_EUTSAHTH myb-type domain-containing protein. (630 aa)    
Predicted Functional Partners:
V4LA92_EUTSA
Telo_bind domain-containing protein.
    
 0.571
V4L6M2_EUTSA
Uncharacterized protein.
      
 0.545
V4KUP7_EUTSA
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.519
V4NU71_EUTSA
Uncharacterized protein.
  
 
  0.487
V4KT38_EUTSA
FLZ-type domain-containing protein.
  
     0.430
V4L903_EUTSA
Uncharacterized protein.
  
 
  0.425
V4LW96_EUTSA
F-box domain-containing protein.
  
 
   0.424
V4MGS0_EUTSA
Uncharacterized protein.
    
 
 0.424
V4MIF8_EUTSA
FBD domain-containing protein.
  
 
   0.423
V4LWD4_EUTSA
F-box domain-containing protein.
  
 
   0.421
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.