STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D0Z67_23175Unannotated protein. (374 aa)    
Predicted Functional Partners:
D0Z67_03935
Unannotated protein; Belongs to the GcvT family.
  
 0.910
D0Z67_23180
Unannotated protein.
       0.812
guaB
Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.740
gcvT
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.692
thpD
Unannotated protein.
    
 0.685
soxA
Unannotated protein; Catalyzes the oxidative demethylation of sarcosine.
  
 
  0.650
D0Z67_24345
Unannotated protein.
    
  0.641
D0Z67_23170
Unannotated protein.
       0.603
D0Z67_04220
Unannotated protein.
   
   0.590
D0Z67_00050
Unannotated protein.
  
 
 0.579
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.