STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_02684Uds1 domain-containing protein. (807 aa)    
Predicted Functional Partners:
GX50_07246
Uncharacterized protein.
   
 0.902
GX50_03722
General transcription factor 3C polypeptide 3 (Transcription factor C subunit 4).
    
  0.489
GX50_00861
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.487
GX50_07356
Uncharacterized protein.
  
 
  0.484
GX50_07263
General transcription factor 3C polypeptide 5 (Transcription factor C subunit 1).
    
  0.473
GX50_00034
Urea carboxylase.
    
  0.451
GX50_04367
Glycyl-tRNA synthetase.
    
  0.440
GX50_00297
Mortality factor 4-like protein 1.
    
  0.439
GX50_02432
Ubiquitin-like domain-containing protein.
    
  0.438
GX50_03040
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.436
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.