STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM_02668Ribosomal protein L39e, putative. (51 aa)    
Predicted Functional Partners:
CCM_01033
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
CCM_00238
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.999
CCM_00239
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
CCM_00267
60S ribosomal protein L27.
   
 0.999
CCM_01151
60S ribosomal protein L27a (L29); Belongs to the universal ribosomal protein uL15 family.
   
 0.999
CCM_00488
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
  
 
 0.999
CCM_01376
40S ribosomal protein S29.
   
 
 0.999
CCM_01609
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.999
CCM_01610
60S ribosomal protein L7.
   
 0.999
CCM_01028
40S ribosomal protein S20.
  
 
 0.999
Your Current Organism:
Cordyceps militaris
NCBI taxonomy Id: 983644
Other names: C. militaris CM01, Cordyceps militaris CM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.