STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM47250.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
cynT
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
     0.719
SEN46891.1
Hpt domain-containing protein.
  
     0.714
ykfC
Cell wall-associated hydrolase, NlpC family.
       0.705
pepA_1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.705
SEM37621.1
Flagellar motor switch protein FliM.
  
     0.690
kdpE
Response regulator receiver domain-containing protein.
  
     0.630
SEM74090.1
Hypothetical protein.
  
     0.586
SEM95551.1
Hypothetical protein.
  
     0.583
SEM54143.1
Hypothetical protein.
  
     0.557
gbh
Guanidinopropionase; Belongs to the arginase family.
       0.556
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.