STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_5517PKS_ER domain-containing protein. (440 aa)    
Predicted Functional Partners:
BMF94_3039
Uncharacterized protein.
     
 0.747
BMF94_1752
Putative Nitrate reductase (NADPH).
    
 0.672
BMF94_0065
Putative Nitrate reductase (NADH); Belongs to the cytochrome b5 family.
    
 0.672
BMF94_4246
Putative D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase.
   
 0.668
BMF94_1719
Uncharacterized protein.
   
 0.668
BMF94_2984
ATP-synt_DE_N domain-containing protein.
    
 0.578
BMF94_5642
Fe-ADH domain-containing protein.
     
 0.564
BMF94_3245
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.559
BMF94_3558
Succinate-semialdehyde dehydrogenase.
   
 0.548
BMF94_5938
ATP synthase subunit gamma.
     
 0.527
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.