STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ65194.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
  
 0.904
EJZ65193.1
Rhamnulose-1-phosphate aldolase.
 
  
 0.871
EJZ65196.1
Rhamnulokinase.
 
  
 0.820
EJZ65197.1
Hypothetical protein.
 
  
 0.788
EJZ63917.1
Hypothetical protein.
 
     0.610
EJZ62056.1
Hypothetical protein.
  
     0.536
EJZ62937.1
Hypothetical protein.
  
     0.488
EJZ62871.1
Hypothetical protein.
  
     0.457
EJZ64649.1
Hypothetical protein.
  
     0.437
EJZ62038.1
Hypothetical protein.
  
     0.435
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.