STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ65197.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
EJZ65194.1
Hypothetical protein.
 
  
 0.788
EJZ65196.1
Rhamnulokinase.
 
   
 0.722
EJZ61901.1
Hypothetical protein.
  
   0.708
EJZ65233.1
Hypothetical protein.
  
   0.683
EJZ65193.1
Rhamnulose-1-phosphate aldolase.
 
   
 0.671
EJZ62866.1
Hypothetical protein.
  
     0.667
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
   
 0.666
EJZ66457.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.659
ribBA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.644
EJZ64611.1
Hypothetical protein.
  
   0.632
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.