STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ64780.1Hypothetical protein; Belongs to the 'phage' integrase family. (330 aa)    
Predicted Functional Partners:
EJZ64781.1
Hypothetical protein.
 
     0.851
EJZ64779.1
Hypothetical protein.
 
     0.795
EJZ62111.1
HsdR family type I site-specific deoxyribonuclease.
 
     0.690
EJZ64775.1
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.666
EJZ66457.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.659
EJZ62112.1
Type I restriction-modification system, M subunit.
 
     0.645
EJZ64776.1
Type I restriction-modification system, M subunit.
 
     0.642
EJZ62116.1
Hypothetical protein.
 
     0.614
EJZ64778.1
Hypothetical protein.
 
     0.613
EJZ64782.1
Hypothetical protein.
 
     0.613
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.