STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63778.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
EJZ63777.1
Hypothetical protein.
 
    0.865
EJZ62029.1
Hypothetical protein.
  
     0.726
EJZ63935.1
Hypothetical protein.
  
     0.710
EJZ65983.1
Hypothetical protein.
  
     0.666
EJZ63781.1
Hypothetical protein.
 
     0.659
EJZ62852.1
Hypothetical protein.
  
     0.652
EJZ65205.1
Hypothetical protein.
  
     0.616
EJZ63780.1
Hypothetical protein.
 
     0.607
EJZ64908.1
Hypothetical protein.
  
     0.557
EJZ63161.1
Hypothetical protein.
  
     0.550
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.