STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63907.1SusC/RagA family TonB-linked outer membrane protein. (1140 aa)    
Predicted Functional Partners:
EJZ63906.1
Hypothetical protein.
 
     0.925
EJZ63904.1
Hypothetical protein.
 
     0.913
EJZ63902.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
   0.878
EJZ63903.1
Hypothetical protein.
 
     0.859
EJZ63908.1
Hypothetical protein.
 
    0.838
EJZ64643.1
Hypothetical protein.
 
     0.766
EJZ61984.1
Hypothetical protein.
  
     0.760
EJZ62037.1
Hypothetical protein.
 
     0.759
EJZ62941.1
Hypothetical protein.
 
     0.758
EJZ62801.1
TonB family domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.754
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.