STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63340.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
EJZ63339.1
Hypothetical protein.
       0.778
EJZ63880.1
Hypothetical protein.
  
 
 0.724
EJZ66457.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.720
EJZ64851.1
Hypothetical protein.
    
  0.669
EJZ64852.1
Hypothetical protein.
    
  0.669
rnfB
Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
  0.667
EJZ62151.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
  0.667
EJZ66272.1
Glutamate synthase (NADPH), homotetrameric.
     
 0.648
EJZ65144.1
Hypothetical protein.
    
  0.629
EJZ65129.1
Hypothetical protein.
    
 0.622
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.