STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63341.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
EJZ63342.1
Hypothetical protein.
 
   
 0.950
EJZ64814.1
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
 0.708
EJZ66457.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.656
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.655
EJZ63343.1
Hypothetical protein.
       0.561
EJZ63344.1
Hypothetical protein.
       0.561
EJZ64701.1
Hypothetical protein.
  
   
 0.459
EJZ64950.1
Hypothetical protein.
  
     0.440
EJZ64740.1
Phage tail tape measure protein, TP901 family, core region.
  
    0.413
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.