STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62952.1Hypothetical protein. (1500 aa)    
Predicted Functional Partners:
EJZ66024.1
Hypothetical protein.
  
  
  0.704
EJZ65934.1
Hypothetical protein.
  
 
  0.695
EJZ62882.1
Por secretion system C-terminal sorting domain-containing protein.
    
  0.653
EJZ64553.1
Hypothetical protein.
     
 0.646
EJZ66026.1
Hypothetical protein.
  
     0.622
EJZ66029.1
Hypothetical protein.
  
     0.582
EJZ66027.1
Hypothetical protein.
  
  
  0.577
EJZ63802.1
SusC/RagA family TonB-linked outer membrane protein.
  
     0.542
EJZ66025.1
Hypothetical protein.
  
     0.535
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.534
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.