Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EJZ62016.1 | EJZ62017.1 | HMPREF9448_02696 | HMPREF9448_02697 | Hypothetical protein. | RNA polymerase sigma-54 factor. | 0.736 |
| EJZ62016.1 | EJZ64874.1 | HMPREF9448_02696 | HMPREF9448_01360 | Hypothetical protein. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.633 |
| EJZ62016.1 | rpoA | HMPREF9448_02696 | HMPREF9448_02451 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.410 |
| EJZ62017.1 | EJZ62016.1 | HMPREF9448_02697 | HMPREF9448_02696 | RNA polymerase sigma-54 factor. | Hypothetical protein. | 0.736 |
| EJZ62017.1 | EJZ63232.1 | HMPREF9448_02697 | HMPREF9448_01880 | RNA polymerase sigma-54 factor. | Hypothetical protein. | 0.825 |
| EJZ62017.1 | EJZ63819.1 | HMPREF9448_02697 | HMPREF9448_01658 | RNA polymerase sigma-54 factor. | Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.712 |
| EJZ62017.1 | EJZ64625.1 | HMPREF9448_02697 | HMPREF9448_01105 | RNA polymerase sigma-54 factor. | Hypothetical protein. | 0.827 |
| EJZ62017.1 | EJZ64874.1 | HMPREF9448_02697 | HMPREF9448_01360 | RNA polymerase sigma-54 factor. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.854 |
| EJZ62017.1 | EJZ65940.1 | HMPREF9448_02697 | HMPREF9448_00114 | RNA polymerase sigma-54 factor. | Hypothetical protein. | 0.826 |
| EJZ62017.1 | EJZ66324.1 | HMPREF9448_02697 | HMPREF9448_00501 | RNA polymerase sigma-54 factor. | Hypothetical protein. | 0.831 |
| EJZ62017.1 | rpoA | HMPREF9448_02697 | HMPREF9448_02451 | RNA polymerase sigma-54 factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.897 |
| EJZ62017.1 | rpoB | HMPREF9448_02697 | HMPREF9448_01960 | RNA polymerase sigma-54 factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.864 |
| EJZ62017.1 | rpoC | HMPREF9448_02697 | HMPREF9448_01959 | RNA polymerase sigma-54 factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.889 |
| EJZ63232.1 | EJZ62017.1 | HMPREF9448_01880 | HMPREF9448_02697 | Hypothetical protein. | RNA polymerase sigma-54 factor. | 0.825 |
| EJZ63819.1 | EJZ62017.1 | HMPREF9448_01658 | HMPREF9448_02697 | Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma-54 factor. | 0.712 |
| EJZ63819.1 | EJZ64874.1 | HMPREF9448_01658 | HMPREF9448_01360 | Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.898 |
| EJZ63819.1 | rpoA | HMPREF9448_01658 | HMPREF9448_02451 | Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.933 |
| EJZ63819.1 | rpoB | HMPREF9448_01658 | HMPREF9448_01960 | Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.942 |
| EJZ63819.1 | rpoC | HMPREF9448_01658 | HMPREF9448_01959 | Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.933 |
| EJZ64625.1 | EJZ62017.1 | HMPREF9448_01105 | HMPREF9448_02697 | Hypothetical protein. | RNA polymerase sigma-54 factor. | 0.827 |
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