STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62093.1Hypothetical protein. (498 aa)    
Predicted Functional Partners:
EJZ63952.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
  
 0.923
EJZ65973.1
Capsular exopolysaccharide family protein.
    
  0.697
EJZ66168.1
Capsular exopolysaccharide family protein.
    
  0.697
EJZ66240.1
Undecaprenyl-phosphate glucose phosphotransferase.
    
  0.697
EJZ64506.1
Capsular exopolysaccharide family protein.
    
  0.697
EJZ63855.1
Capsular exopolysaccharide family protein.
    
  0.697
EJZ62838.1
FeS assembly SUF system protein.
    
 0.680
EJZ64874.1
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.638
EJZ62512.1
Hypothetical protein.
    
 0.618
EJZ63763.1
Hypothetical protein.
  
     0.610
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.