STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG43652.1KEGG: aai:AARI_15500 hypothetical protein. (224 aa)    
Predicted Functional Partners:
AEG43653.1
KEGG: bcv:Bcav_3917 hypothetical protein.
       0.701
AEG43654.1
KEGG: bcv:Bcav_3918 hypothetical protein.
       0.665
AEG43232.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2027 binding-protein-dependent transport systems inner membrane component.
  
  
 0.655
AEG45510.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0179 binding-protein-dependent transport systems inner membrane component.
  
  
 0.655
AEG43651.1
KEGG: cmi:CMM_0491 hypothetical protein.
       0.636
AEG43649.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: psa:PST_1474 chemotaxis protein MotB-related protein.
   
   0.579
AEG43656.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: bcv:Bcav_3915 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific.
       0.446
AEG43655.1
KEGG: bcv:Bcav_3916 hypothetical protein.
       0.443
AEG44428.1
Major facilitator superfamily MFS_1; KEGG: aai:AARI_07080 MFS superfamily transporter; manually curated; PFAM: Major facilitator superfamily MFS-1.
  
    0.440
AEG44794.1
PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2255 major facilitator superfamily protein.
  
    0.440
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.