STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG45641.1Regulatory protein ArsR; KEGG: apn:Asphe3_41010 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. (115 aa)    
Predicted Functional Partners:
AEG45642.1
PFAM: Cation efflux protein; KEGG: ica:Intca_2655 cation efflux protein.
 
   
 0.895
AEG45643.1
KEGG: xce:Xcel_3334 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein.
     
 0.729
AEG45639.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: cmi:CMM_1510 putative hydrolase.
       0.683
AEG45640.1
KEGG: ske:Sked_05660 hypothetical protein.
       0.682
AEG45638.1
KEGG: fre:Franean1_4201 alpha/beta hydrolase domain-containing protein.
       0.594
AEG45637.1
Hypothetical protein.
       0.429
Your Current Organism:
Isoptericola variabilis
NCBI taxonomy Id: 743718
Other names: I. variabilis 225, Isoptericola variabilis 225, Isoptericola variabilis str. 225, Isoptericola variabilis strain 225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.