STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV28753.1TIGRFAM: sugar transporter; KEGG: ttu:TERTU_0386 MFS transporter, SP family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (480 aa)    
Predicted Functional Partners:
xylA
TIGRFAM: xylose isomerase; KEGG: xcb:XC_4191 xylose isomerase; region: PLN02923; PLN02923; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family.
 
   
 0.640
xylB
Xylulokinase; KEGG: xal:XALc_1195 probable xylulose kinase protein; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
     
 0.483
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
      
 0.412
Your Current Organism:
Pseudoxanthomonas suwonensis 111
NCBI taxonomy Id: 743721
Other names: P. suwonensis 11-1, Pseudoxanthomonas suwonensis 11-1, Pseudoxanthomonas suwonensis str. 11-1, Pseudoxanthomonas suwonensis strain 11-1
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.