STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ78716.1KEGG: dfe:Dfer_2138 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Belongs to the RuBisCO large chain family. (414 aa)    
Predicted Functional Partners:
ADZ78717.1
PFAM: Protein of unknown function, DUF1537; KEGG: dfe:Dfer_2139 type III effector Hrp-dependent outers.
 
   
 0.956
ADZ78718.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: dfe:Dfer_2141 Asp/Glu/hydantoin racemase.
 
     0.946
ADZ77861.1
PFAM: Bacterial transferase hexapeptide repeat; KEGG: phe:Phep_0011 acetyltransferase/carbonic anhydrase.
    
 
 0.872
ADZ78719.1
PFAM: Bile acid:sodium symporter; KEGG: dfe:Dfer_2140 bile acid:sodium symporter.
 
     0.819
ADZ77600.1
KEGG: phe:Phep_2730 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal.
  
  
 0.645
ADZ77552.1
KEGG: phe:Phep_0524 hypothetical protein.
 
   
 0.643
ADZ76961.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  
 0.619
pgk
HAMAP: Phosphoglycerate kinase; KEGG: phe:Phep_3335 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.595
ADZ79919.1
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: phe:Phep_1875 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme.
   
  
 0.525
ADZ78720.1
PFAM: Glycoside hydrolase, family 43; KEGG: dfe:Dfer_0823 glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
       0.517
Your Current Organism:
Sphingobacterium sp. 21
NCBI taxonomy Id: 743722
Other names: S. sp. 21
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.