STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN42495.1Divergent AAA domain. (488 aa)    
Predicted Functional Partners:
CUN99584.1
Uncharacterised protein.
  
    0.637
CUN33684.1
Predicted ATPase (AAA+ superfamily).
  
     0.556
CUN33617.1
EcoKI restriction-modification system protein HsdS.
 
    0.549
CUN60064.1
Predicted ATPase (AAA+ superfamily).
  
     0.494
CUN68087.1
Uncharacterised protein.
 
     0.494
CUN64956.1
Uncharacterised protein.
 
     0.490
CUN35828.1
Chromosome segregation protein SMC.
 
     0.475
CUO04024.1
Protein involved in cell division.
 
     0.472
CUN33625.1
EcoKI restriction-modification system protein HsdS.
  
    0.471
hsdS
Type I restriction enzyme EcoKI specificity protein.
  
    0.471
Your Current Organism:
Collinsella aerofaciens
NCBI taxonomy Id: 74426
Other names: ATCC 25986, Bacteroides aerofaciens, C. aerofaciens, CCUG 28087, DSM 3979, Eubacterium aerofaciens, JCM 10188, NCTC 11838, Pseudobacterium aerofaciens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.