STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFO34370.1Transposase IS4. (303 aa)    
Predicted Functional Partners:
EFO34371.1
Transposase, IS4 family protein.
     0.949
EFO34068.1
Transposase IS4; Identified by match to protein family HMM PF01609.
 
     0.791
EFO31141.1
Transposase, IS4 family; Identified by match to protein family HMM PF01609.
 
     0.790
EFO28603.1
Identified by match to protein family HMM PF01609.
 
     0.788
EFO33532.1
Transposase, IS4 family protein.
 
     0.775
EFO28803.1
Identified by match to protein family HMM PF01609.
 
     0.775
EFO34088.1
Transposase, IS4 family protein.
 
     0.774
EFO33311.1
Transposase, IS4 family; Identified by match to protein family HMM PF01609.
 
     0.774
EFO34369.1
Transposase, IS4 family protein.
 
    
0.416
Your Current Organism:
Roseibium sp. TrichSKD4
NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.