STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potGPutrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (382 aa)    
Predicted Functional Partners:
potH
Putrescine transport system permease protein PotH; Identified by match to protein family HMM PF00528.
 0.998
EFO28493.1
Putrescine transport system permease protein PotI; Identified by match to protein family HMM PF00528.
 
 0.989
EFO28496.1
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.985
EFO33007.1
Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
 0.933
EFO33006.1
Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
 
 0.929
EFO28725.1
Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
 
 0.928
EFO28726.1
PotC protein; Identified by match to protein family HMM PF00528.
 
 
 0.898
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.861
EFO33008.1
Polyamine ABC transporter, periplasmic polyamine-binding protein.
 
 
 0.856
EFO28489.1
ABC transporter, membrane spanning protein; Identified by match to protein family HMM PF00528.
 
 0.752
Your Current Organism:
Roseibium sp. TrichSKD4
NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.