SKA80938.1 protein (Gemmiger formicilis) - STRING interaction network

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Score

SKA80938.1

Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. (81 aa)

Predicted Functional Partners:

rplS

0.955

rplQ

0.929

rpmB

0.927

rplM

0.923

rplN

0.923

rpmH

0.923

rplV

0.922

rplT

0.920

rplD

0.920

rpmG

0.919

Your Current Organism:

Gemmiger formicilis

NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SKA80938.1	rplD	SAMN02745178_01043	SAMN02745178_00545	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.920
SKA80938.1	rplM	SAMN02745178_01043	SAMN02745178_00431	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.923
SKA80938.1	rplN	SAMN02745178_01043	SAMN02745178_00554	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.923
SKA80938.1	rplQ	SAMN02745178_01043	SAMN02745178_00573	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L17.	0.929
SKA80938.1	rplS	SAMN02745178_01043	SAMN02745178_01127	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.955
SKA80938.1	rplT	SAMN02745178_01043	SAMN02745178_00354	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.920
SKA80938.1	rplV	SAMN02745178_01043	SAMN02745178_00549	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.922
SKA80938.1	rpmB	SAMN02745178_01043	SAMN02745178_00765	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.927
SKA80938.1	rpmG	SAMN02745178_01043	SAMN02745178_00048	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.919
SKA80938.1	rpmH	SAMN02745178_01043	SAMN02745178_02241	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	Large subunit ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.923
rplD	SKA80938.1	SAMN02745178_00545	SAMN02745178_01043	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.	0.920
rplD	rplM	SAMN02745178_00545	SAMN02745178_00431	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplD	rplN	SAMN02745178_00545	SAMN02745178_00554	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplD	rplQ	SAMN02745178_00545	SAMN02745178_00573	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Large subunit ribosomal protein L17.	0.998
rplD	rplS	SAMN02745178_00545	SAMN02745178_01127	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rplD	rplT	SAMN02745178_00545	SAMN02745178_00354	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.998
rplD	rplV	SAMN02745178_00545	SAMN02745178_00549	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
rplD	rpmB	SAMN02745178_00545	SAMN02745178_00765	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplD	rpmG	SAMN02745178_00545	SAMN02745178_00048	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.989
rplD	rpmH	SAMN02745178_00545	SAMN02745178_02241	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Large subunit ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.980