STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA92957.1Arylsulfatase A. (477 aa)    
Predicted Functional Partners:
SKA92950.1
Uncharacterized protein.
 
   0.975
SKA96093.1
Uncharacterized protein.
 
   0.936
SKA93070.1
Uncharacterized protein.
 
   0.841
SKA89681.1
Uncharacterized protein.
  
   0.767
SKA92962.1
alpha-L-fucosidase.
 
   
 0.725
SKA92975.1
alpha-L-fucosidase 2.
 
     0.718
SKA92936.1
Chromate transporter.
       0.600
SKA92943.1
Chromate transporter.
       0.599
SKA92970.1
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase.
       0.566
SKA72863.1
Hypothetical protein.
   
   0.549
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
Server load: low (30%) [HD]