STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49627.1Conserved hypothetical protein; Alternative locus ID: P9312_05911. (408 aa)    
Predicted Functional Partners:
ABB49628.1
NADPH-glutathione reductase; Alternative locus ID: P9312_05921.
  
 0.977
ABB50076.1
Glutathione peroxidase; Alternative locus ID: P9312_10871; Belongs to the glutathione peroxidase family.
   
 
 0.937
gshB
Glutathione synthase; Alternative locus ID: P9312_01881; Belongs to the prokaryotic GSH synthase family.
    
 0.904
ABB49175.1
Putative glutathione S-transferase; Alternative locus ID: P9312_01191.
     
  0.900
ABB49691.1
Glutathione S-transferase; Similar to N terminal region; Alternative locus ID: P9312_06571.
     
  0.900
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.792
ABB50332.1
Conserved hypothetical protein; Alternative locus ID: P9312_13911.
  
     0.721
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.707
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.669
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.668
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.