STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyAPhycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (241 aa)    
Predicted Functional Partners:
ABB50747.1
Heme oxygenase (decyclizing); Alternative locus ID: P9312_18371.
 
  
 0.952
pebA
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
  
  
 0.947
ABB49817.1
DevC protein; Alternative locus ID: P9312_08091.
 
     0.895
ABB49816.1
ABC transporter component-like protein; Alternative locus ID: P9312_08081.
 
     0.866
ABB49818.1
ATPase; Alternative locus ID: P9312_08101.
       0.832
ABB49819.1
Conserved hypothetical protein; Alternative locus ID: P9312_08111.
       0.791
ABB50488.1
Conserved hypothetical protein; Alternative locus ID: P9312_15491.
  
     0.772
ABB49168.1
Conserved hypothetical protein; Alternative locus ID: P9312_01121.
  
     0.770
ABB49741.1
Conserved hypothetical protein; Alternative locus ID: P9312_07111.
  
     0.769
ABB49965.1
Conserved hypothetical protein; Alternative locus ID: P9312_09631.
  
     0.766
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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