STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpiARibose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (237 aa)    
Predicted Functional Partners:
ABB49834.1
Ribulose-5-phosphate 3-epimerase; Alternative locus ID: P9312_08261; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.955
ABB50764.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 0.947
ABB49838.1
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 
 0.940
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 
 0.936
ABB49140.1
Phosphoglucomutase; Alternative locus ID: P9312_00811.
  
 
 0.923
ABB50114.1
PfkB family carbohydrate kinase-like protein; Alternative locus ID: P9312_11401.
    
 0.908
ABB49853.1
Phosphoribulokinase; Alternative locus ID: P9312_08461.
     
 0.900
ABB49377.1
Carbohydrate kinase, FGGY family; Alternative locus ID: P9312_03251.
    
 0.877
ABB50410.1
2-deoxy-D-gluconate 3-dehydrogenase; Alternative locus ID: P9312_14701.
     
 0.800
ABB50643.1
PDZ/DHR/GLGF protein; Alternative locus ID: P9312_17331.
       0.725
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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