STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMT_1489Conserved hypothetical; Alternative locus ID:P9313_18771 (229 aa)    
Predicted Functional Partners:
bioF
Putative 8-amino-7-oxononanoate synthase; Alternative locus ID:P9313_18761; Citation: Otsuka et al. (1988) J. Biol. Chem. 263:19577-19585; Alexeev et al. (1998) J. Mol. Biol. 284:401-419
    
  0.981
PMT_1490
Uncharacterized protein; Alternative locus ID:P9313_18781; possible SAM-dependent methyltransferase
 
     0.916
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH]; Alternative locus ID:P9313_23711
    
  0.900
BioD
ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
       0.852
PMT_2719
Uncharacterized protein; Alternative locus ID: P9313_18801
       0.845
PMT_0438
Uncharacterized protein; Alternative locus ID:P9313_05191
  
     0.779
PMT_1702
Uncharacterized protein; Alternative locus ID:P9313_21651
  
     0.779
PMT_1349
Uncharacterized protein; Alternative locus ID:P9313_16971
  
     0.777
PMT_1147
Uncharacterized protein; Alternative locus ID:P9313_14551
 
     0.774
PMT_0441
Conserved hypothetical; Alternative locus ID:P9313_05221
  
     0.773
Your Current Organism:
Prochlorococcus marinus MIT9313
NCBI taxonomy Id: 74547
Other names: P. marinus str. MIT 9313, Prochlorococcus marinus MIT9313, Prochlorococcus marinus str. MIT 9313, Prochlorococcus sp. MIT 9313, Prochlorococcus sp. MIT9313
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