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rpl9, protein (Prochlorococcus marinus MIT9313) - STRING interaction network
"rpl9," - 50S ribosomal protein L9 in Prochlorococcus marinus MIT9313
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
rpl9,50S ribosomal protein L9; Binds to the 23S rRNA (152 aa)    
Predicted Functional Partners:
rps18,
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (73 aa)
   
 
  0.999
rpl27,
50S ribosomal protein L27; Alternative locus ID-P9313_17911; Belongs to the bacterial ribosomal protein bL27 family (88 aa)
     
 
  0.998
rpl17,
50S ribosomal protein L17; Alternative locus ID-P9313_22251 (116 aa)
   
 
  0.998
rps6,
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (124 aa)
   
 
  0.998
rpl3,
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (218 aa)
     
 
  0.998
rps9,
30S ribosomal protein S9; Alternative locus ID-P9313_22281; Belongs to the universal ribosomal protein uS9 family (135 aa)
     
 
  0.998
rpl19
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (158 aa)
     
 
  0.998
rpl28,
50S ribosomal protein L28; Frameshift; similar to P9303_15271; Belongs to the bacterial ribosomal protein bL28 family (78 aa)
     
 
  0.998
rps10,
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (106 aa)
   
 
  0.997
rpl21,
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (129 aa)
     
 
  0.997
Your Current Organism:
Prochlorococcus marinus MIT9313
NCBI taxonomy Id: 74547
Other names: P. marinus str. MIT 9313, Prochlorococcus marinus MIT9313, Prochlorococcus marinus str. MIT 9313, Prochlorococcus sp. MIT 9313, Prochlorococcus sp. MIT9313
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