STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518505_03182Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000518505_03183
Unannotated protein.
 
     0.868
GCA_000518505_00806
Unannotated protein.
    
 0.857
GCA_000518505_00356
Unannotated protein.
  
 0.730
GCA_000518505_02039
Unannotated protein.
  
 0.649
GCA_000518505_00406
Unannotated protein.
  
  
  0.621
GCA_000518505_02183
Unannotated protein.
   
 0.593
GCA_000518505_01986
Unannotated protein.
    
  0.525
GCA_000518505_02640
Unannotated protein.
    
 
 0.496
GCA_000518505_01525
Unannotated protein.
    
   0.495
GCA_000518505_02639
Unannotated protein.
    
 
 0.490
Your Current Organism:
Olleya sp. VCSA23
NCBI taxonomy Id: 745717
Other names: O. sp. VCSA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.