Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFD24426.1 | AFD24924.1 | DGo_CA0499 | DGo_CA0997 | Hypothetical protein. | Hypothetical protein. | 0.531 |
| AFD24426.1 | AFD25429.1 | DGo_CA0499 | DGo_CA1502 | Hypothetical protein. | Membrane protein of unknown function. | 0.479 |
| AFD24924.1 | AFD24426.1 | DGo_CA0997 | DGo_CA0499 | Hypothetical protein. | Hypothetical protein. | 0.531 |
| AFD24924.1 | AFD25429.1 | DGo_CA0997 | DGo_CA1502 | Hypothetical protein. | Membrane protein of unknown function. | 0.840 |
| AFD25425.1 | AFD25429.1 | DGo_CA1498 | DGo_CA1502 | 4-alpha-glucanotransferase. | Membrane protein of unknown function. | 0.407 |
| AFD25425.1 | greA | DGo_CA1498 | DGo_CA1499 | 4-alpha-glucanotransferase. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.575 |
| AFD25425.1 | panC | DGo_CA1498 | DGo_CA1501 | 4-alpha-glucanotransferase. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.491 |
| AFD25425.1 | pilT | DGo_CA1498 | DGo_CA1500 | 4-alpha-glucanotransferase. | Putative ATPase involved in pili biogenesis, PilT-like protein. | 0.403 |
| AFD25429.1 | AFD24426.1 | DGo_CA1502 | DGo_CA0499 | Membrane protein of unknown function. | Hypothetical protein. | 0.479 |
| AFD25429.1 | AFD24924.1 | DGo_CA1502 | DGo_CA0997 | Membrane protein of unknown function. | Hypothetical protein. | 0.840 |
| AFD25429.1 | AFD25425.1 | DGo_CA1502 | DGo_CA1498 | Membrane protein of unknown function. | 4-alpha-glucanotransferase. | 0.407 |
| AFD25429.1 | AFD25430.1 | DGo_CA1502 | DGo_CA1503 | Membrane protein of unknown function. | Hypothetical protein. | 0.547 |
| AFD25429.1 | greA | DGo_CA1502 | DGo_CA1499 | Membrane protein of unknown function. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.647 |
| AFD25429.1 | panC | DGo_CA1502 | DGo_CA1501 | Membrane protein of unknown function. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.731 |
| AFD25429.1 | pilT | DGo_CA1502 | DGo_CA1500 | Membrane protein of unknown function. | Putative ATPase involved in pili biogenesis, PilT-like protein. | 0.555 |
| AFD25430.1 | AFD25429.1 | DGo_CA1503 | DGo_CA1502 | Hypothetical protein. | Membrane protein of unknown function. | 0.547 |
| greA | AFD25425.1 | DGo_CA1499 | DGo_CA1498 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 4-alpha-glucanotransferase. | 0.575 |
| greA | AFD25429.1 | DGo_CA1499 | DGo_CA1502 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Membrane protein of unknown function. | 0.647 |
| greA | panC | DGo_CA1499 | DGo_CA1501 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.671 |
| greA | pilT | DGo_CA1499 | DGo_CA1500 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Putative ATPase involved in pili biogenesis, PilT-like protein. | 0.626 |
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