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GB10535-PA protein (Apis mellifera) - STRING interaction network
"GB10535-PA" - Peptide deformylase in Apis mellifera
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GB10535-PAPeptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins (233 aa)    
Predicted Functional Partners:
LOC724643
Borealin-like (287 aa)
       
      0.784
pug
C-1-tetrahydrofolate synthase, cytoplasmic (937 aa)
         
  0.755
mRpL17
Mitochondrial ribosomal protein L17 (180 aa)
     
 
  0.741
Cad
Conserved ATPase domain protein (2256 aa)
   
   
  0.737
RpL17
Ribosomal protein L17 (185 aa)
     
      0.647
mRpL22
Mitochondrial ribosomal protein L22 (211 aa)
     
      0.640
GB12123
glutamyl-prolyl-tRNA synthetase (1572 aa)
   
   
  0.631
GB11911-PA
Annotation not available (1329 aa)
   
   
  0.613
GB15500-PA
Uncharacterized protein (982 aa)
   
   
  0.574
Aats-tyr
tyrosyl-tRNA synthetase (522 aa)
   
   
  0.565
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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