STRINGSTRING
LOC408945 protein (Apis mellifera) - STRING interaction network
"LOC408945" - Sorting nexin-27-like in Apis mellifera
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC408945Sorting nexin-27-like (530 aa)    
Predicted Functional Partners:
LOC412764
MFS-type transporter C6orf192 homolog (502 aa)
       
      0.493
LOC725492
Sorting nexin-2-like (379 aa)
         
  0.421
Vps26
Vacuolar protein sorting 26 (374 aa)
       
  0.418
LOC726132
WASH complex subunit CCDC53-like (160 aa)
         
  0.415
LOC725700
Vacuolar protein sorting-associated protein 29-like; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (169 aa)
         
  0.414
LOC413831
Sorting nexin-9-like (537 aa)
           
  0.402
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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