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LCCH3 protein (Apis mellifera) - STRING interaction network
"LCCH3" - GABA-gated ion channel in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCCH3GABA-gated ion channel (381 aa)    
Predicted Functional Partners:
pHCl
PH-sensitive chloride channel variant 4 (537 aa)
     
0.654
GB16240-PA
Uncharacterized protein (59 aa)
     
  0.647
Amel_8916
Cys-loop ligand-gated ion channel subunit (355 aa)
       
0.636
Grd
GABA-gated ion channel (463 aa)
       
0.625
AmCG12344
Cys-loop ligand-gated ion channel subunit (385 aa)
     
0.624
Amel_6927
Cys-loop ligand-gated ion channel subunit (476 aa)
     
0.622
Hiscl2
Histamine-gated chloride channel (375 aa)
     
0.614
GB11903-PA
Cys-loop ligand-gated ion channel subunit (1242 aa)
     
0.606
GB19505-PA
Annotation not available (475 aa)
     
0.606
nAChRb1
Nicotinic acetylcholine receptor beta1 subunit (520 aa)
     
   
  0.574
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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