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LOC410225 protein (Apis mellifera) - STRING interaction network
"LOC410225" - Probable E3 ubiquitin-protein ligase RNF144A-like in Apis mellifera
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC410225Probable E3 ubiquitin-protein ligase RNF144A-like (415 aa)    
Predicted Functional Partners:
LOC413822
Ubiquitin-conjugating enzyme E2 L3-like (158 aa)
     
  0.798
GB18525-PA
Uncharacterized protein (2400 aa)
     
  0.765
LOC409303
E3 ubiquitin-protein ligase MIB2-like (1009 aa)
     
  0.755
GB13756-PA
Annotation not available (580 aa)
     
  0.755
Mib
Ubiquitin ligase protein mind-bomb (613 aa)
     
  0.749
LOC410848
jmjC domain-containing histone demethylation protein 1-like (983 aa)
     
 
    0.727
LOC409382
Probable E3 ubiquitin-protein ligase TRIP12-like (2071 aa)
     
 
    0.721
UbcD6
Uncharacterized protein (151 aa)
     
  0.689
GB16174
Uncharacterized LOC410237 (3584 aa)
       
  0.664
HERC2
E3 ubiquitin-protein ligase HERC2 (4792 aa)
     
  0.663
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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