STRINGSTRING
Ssrp protein (Apis mellifera) - STRING interaction network
"Ssrp" - Structure specific recognition protein in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SsrpStructure specific recognition protein (620 aa)    
Predicted Functional Partners:
dre4
FACT complex subunit spt16 (1113 aa)
     
  0.998
Atu
Another transcription unit protein (585 aa)
     
  0.986
Rtf1
RNA polymerase-associated protein Rtf1 (695 aa)
     
  0.985
CTR9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (1201 aa)
     
  0.985
LOC725238
Uncharacterized LOC725238 (380 aa)
     
  0.985
atms
Antimeros (549 aa)
     
  0.984
CkIIalpha
Casein kinase II alpha subunit (350 aa)
     
  0.980
CkIIbeta
Casein kinase II beta subunit; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (221 aa)
     
  0.973
LOC726447
Histone H2B.3-like; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (123 aa)
     
  0.964
GB12922-PA
Annotation not available (67 aa)
     
  0.964
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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