STRINGSTRING
LOC408656 protein (Apis mellifera) - STRING interaction network
"LOC408656" - Uncharacterized LOC408656 in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC408656Uncharacterized LOC408656 (1163 aa)    
Predicted Functional Partners:
LOC551671
Oligoribonuclease-like protein (155 aa)
   
  0.894
mus209
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (261 aa)
     
  0.872
LOC409718
PAB-dependent poly(A)-specific ribonuclease subunit 3-like; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by poly(A)-binding protein (PABP), which is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3’-5’ exonucleolytic degradation, or deadenlyation-dependent mRNA [...] (607 aa)
     
  0.861
shn
Schnurri (1371 aa)
       
  0.827
GB13229
Uncharacterized LOC410204 (1836 aa)
       
      0.812
LOC725324
Uncharacterized LOC725324 (709 aa)
         
0.804
LOC410766
Uncharacterized LOC410766 (687 aa)
     
 
0.803
LOC724203
Brix domain-containing protein 2 homolog (344 aa)
     
        0.726
GB18701-PA
Uncharacterized protein (231 aa)
       
  0.721
LOC411192
Ribosome biogenesis regulatory protein homolog (339 aa)
     
      0.683
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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