STRINGSTRING
LOC408541 protein (Apis mellifera) - STRING interaction network
"LOC408541" - Negative elongation factor A-like in Apis mellifera
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC408541Negative elongation factor A-like (527 aa)    
Predicted Functional Partners:
TH1
Negative elongation factor D (463 aa)
     
  0.983
Spt5
Transcription elongation factor SPT5 (948 aa)
     
  0.936
Nelf-E
Negative elongation factor E (272 aa)
       
  0.890
GB13532-PA
Uncharacterized protein (495 aa)
     
  0.873
RpII140
RNA polymerase II 140kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1131 aa)
     
    0.785
LOC552458
DNA-directed RNA polymerase II subunit RPB3-like (276 aa)
     
    0.777
spt4
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II (116 aa)
         
  0.770
RpII215
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1278 aa)
     
  0.701
LOC725552
DNA-directed RNA polymerase III subunit RPC1-like; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1376 aa)
     
  0.701
Ssrp
Structure specific recognition protein (620 aa)
     
 
    0.677
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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