STRINGSTRING
LOC412159 protein (Apis mellifera) - STRING interaction network
"LOC412159" - pre-mRNA-splicing factor SYF1-like in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC412159pre-mRNA-splicing factor SYF1-like (836 aa)    
Predicted Functional Partners:
crn
Crooked neck (682 aa)
     
0.998
LOC410547
pre-mRNA-splicing factor Syf2 (230 aa)
     
  0.996
LOC552527
Cell division cycle 5-like protein-like (781 aa)
     
  0.993
PRP17
pre-mRNA splicing factor PRP17 (502 aa)
     
  0.993
Prp19
pre-mRNA-processing factor 19 (504 aa)
     
  0.991
LOC412966
Annotation not available (162 aa)
     
  0.990
Tango4
Transport and golgi organization 4 (455 aa)
     
  0.989
LOC550940
Annotation not available (1155 aa)
     
  0.988
Bx42
Puff-specific protein Bx42 (542 aa)
     
  0.984
LOC551620
pre-mRNA-processing-splicing factor 8-like (2202 aa)
     
  0.984
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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