STRINGSTRING
Atg4 protein (Apis mellifera) - STRING interaction network
"Atg4" - Autophagy-specific gene 4 in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg4Autophagy-specific gene 4 (382 aa)    
Predicted Functional Partners:
Atg8a
Autophagy-specific gene 8a (117 aa)
     
  0.980
LOC411870
Microtubule-associated proteins 1A/1B light chain 3A-like (122 aa)
     
  0.956
Aut1
Autophagy 1 (327 aa)
     
 
  0.948
LOC410257
Cysteine protease ATG4D-like (477 aa)
         
0.822
LOC413467
Serine/threonine-protein kinase ULK3-like (481 aa)
     
 
  0.809
Atg1
Autophagy-specific gene 1 (752 aa)
     
 
  0.809
Atg6
Autophagy-specific gene 6 (430 aa)
     
 
  0.718
LOC552201
WD repeat domain phosphoinositide-interacting protein 2-like (396 aa)
     
 
  0.707
LOC726637
Ubiquitin-like modifier-activating enzyme atg7-like (698 aa)
     
 
  0.696
GB30124-PA
Annotation not available (176 aa)
     
 
  0.685
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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