STRINGSTRING
LOC551823 protein (Apis mellifera) - STRING interaction network
"LOC551823" - Uncharacterized LOC551823 in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC551823Uncharacterized LOC551823 (785 aa)    
Predicted Functional Partners:
LOC551620
pre-mRNA-processing-splicing factor 8-like (2202 aa)
     
  0.979
LOC414039
Probable small nuclear ribonucleoprotein Sm D2-like (120 aa)
     
  0.974
LOC725947
U6 snRNA-associated Sm-like protein LSm6-like; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5 (79 aa)
     
  0.974
SmG
Small ribonucleoprotein G (74 aa)
       
    0.955
LOC725401
U6 snRNA-associated Sm-like protein LSm3-like (103 aa)
       
  0.944
PRPF4
PRP4 pre-mRNA processing factor 4 (525 aa)
     
  0.933
crn
Crooked neck (682 aa)
     
  0.931
LOC552814
Activating signal cointegrator 1 complex subunit 3-like (1568 aa)
     
  0.928
GB15157
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase-like (2100 aa)
     
  0.928
Smb
Small ribonucleoprotein particle protein B (217 aa)
     
  0.916
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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