STRINGSTRING
hyd protein (Apis mellifera) - STRING interaction network
"hyd" - E3 ubiquitin-protein ligase hyd in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hydE3 ubiquitin-protein ligase hyd (2823 aa)    
Predicted Functional Partners:
GB13573-PA
Annotation not available (1235 aa)
     
  0.691
LOC413388
Histone-lysine N-methyltransferase EHMT1-like (1283 aa)
     
  0.689
LOC412281
E3 ubiquitin-protein ligase UBR4-like (2789 aa)
     
 
  0.623
Smad4
Mothers against decapentaplegic homolog 4 (663 aa)
     
  0.620
Ame.23144
Uncharacterized protein (417 aa)
     
  0.603
GB19187-PA
Annotation not available (235 aa)
     
  0.603
GB11582
Mothers against dpp (468 aa)
     
  0.603
LOC551182
Phosphatidylinositol 4-kinase alpha-like (2476 aa)
     
  0.598
LOC551718
Ubiquitin-like protein 4A-like (150 aa)
       
  0.591
GB19365-PA
Uncharacterized protein (342 aa)
       
  0.591
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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