STRINGSTRING
LOC409829 protein (Apis mellifera) - STRING interaction network
"LOC409829" - f-box/LRR-repeat protein 20-like in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC409829f-box/LRR-repeat protein 20-like (435 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1 (162 aa)
       
  0.890
LOC410565
Cullin-1-like (777 aa)
     
  0.784
LOC409382
Probable E3 ubiquitin-protein ligase TRIP12-like (2071 aa)
     
 
  0.733
Mib
Ubiquitin ligase protein mind-bomb (613 aa)
     
    0.731
LOC409303
E3 ubiquitin-protein ligase MIB2-like (1009 aa)
     
 
    0.727
GB13756-PA
Annotation not available (580 aa)
     
 
    0.727
LOC410848
jmjC domain-containing histone demethylation protein 1-like (983 aa)
     
 
0.723
LOC409753
Uncharacterized protein (434 aa)
         
    0.721
Roc1a
RING-box protein 1A (113 aa)
     
  0.717
HERC2
E3 ubiquitin-protein ligase HERC2 (4792 aa)
     
 
  0.655
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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