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LOC725641 protein (Apis mellifera) - STRING interaction network
"LOC725641" - U6 snRNA-associated Sm-like protein LSm5-like in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC725641U6 snRNA-associated Sm-like protein LSm5-like (91 aa)    
Predicted Functional Partners:
LOC725401
U6 snRNA-associated Sm-like protein LSm3-like (103 aa)
     
  0.999
Lsm7
U6 snRNA-associated Sm-like protein LSm7 (109 aa)
     
  0.999
LOC552155
N-alpha-acetyltransferase 38, NatC auxiliary subunit-like (96 aa)
     
  0.998
LOC725142
U6 snRNA-associated Sm-like protein LSm2-like (94 aa)
     
  0.998
LOC725947
U6 snRNA-associated Sm-like protein LSm6-like; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5 (79 aa)
     
  0.998
LOC552529
U6 snRNA-associated Sm-like protein LSm4-like (124 aa)
     
  0.997
SmG
Small ribonucleoprotein G (74 aa)
     
  0.993
DebB
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5 (88 aa)
     
  0.992
LOC552260
U6 snRNA-associated Sm-like protein LSm1-like (134 aa)
     
  0.990
SmD3
Small ribonucleoprotein Sm D3 (142 aa)
     
  0.982
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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