STRINGSTRING
LOC552117 protein (Apis mellifera) - STRING interaction network
"LOC552117" - Syntaxin-5-like in Apis mellifera
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC552117Syntaxin-5-like (364 aa)    
Predicted Functional Partners:
membrin
Golgi SNAP receptor complex member 2-like protein (212 aa)
     
  0.997
LOC413394
Vesicle-trafficking protein SEC22b-B-like (213 aa)
     
  0.997
LOC726840
BET1 homolog (67 aa)
     
  0.996
LOC410849
SLY-1 homologous (629 aa)
     
  0.990
Ykt6
YKT6 v-SNARE protein (200 aa)
     
  0.989
Gos28
28 kDa Golgi SNARE protein; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (232 aa)
     
  0.988
LOC551363
Vesicle transport through interaction with t-SNAREs homolog 1A-like (219 aa)
     
  0.982
usnp
Ubisnap (262 aa)
     
  0.976
Vamp7
Vesicle-associated membrane protein 7 (221 aa)
     
  0.973
Syx8
Syntaxin 8 (250 aa)
     
  0.972
Your Current Organism:
Apis mellifera
NCBI taxonomy Id: 7460
Other names: A. mellifera, Anthophoridae, Apidae, Apinae, Apini, Apis, Apis mellifera, Apis mellifica, Apoidea, bee, bees, bumble bees and honey bees, honey bee, honey bees, honeybee
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